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Division of Life Sciences, Kings College London, London, United Kingdom.
Correspondence to Professor R.G. Price, Division of Life Sciences, Kings College London, 150 Stamford Street, London SE1 9NN, UK. Phone: +44-0-2078484451; Fax: +44-0-2078484500; E-mail: robert.price{at}kcl.ac.uk
| Abstract |
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460 kD. The purpose of this study is to investigate the binding of the cystein-flanked leucine-rich repeats (LRR) of polycystin-1 to extracellular matrix (ECM) components. These interactions may play a role in normal renal development as well as the pathogenesis of autosomal-dominant polycystic kidney disease (ADPKD). In vitro assays were used to assess the binding of a fusion protein containing the LRR of polycystin-1 and that of affinity purified polycystin-1 to a number of ECM components. The results showed that the LRR modulate the binding of polycystin-1 to collagen I, fibronectin, laminin, and cyst fluidderived laminin fragments. The addition of the LRR fusion protein to cells in culture resulted in a significant dose-dependant reduction in the rate of proliferation. Cyst fluidderived laminin fragments had a stimulatory effect on cell proliferation, which was reversed by the LRR fusion protein. These results suggest that the LRR of polycystin-1 act as mediators of the polycystin-1 interaction with the ECM. The observed suppression effect of the LRR on cell proliferation suggests a functional role of the LRR-mediated polycystin-1 involvement in cell-matrix and cell-cell interactions. These interactions may result in the enhanced cell proliferation that is a characteristic feature of ADPKD. | Introduction |
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1:1000 (1). The predominantly affected organ in ADPKD is the kidney, which is characterized by enlargement of tubule segments to form epithelial-lined fluid-filled cysts (2). There are different forms of ADPKD, which are caused by mutations in at least three different alleles. Approximately 85% of ADPKD cases are caused by mutations in the PKD1 locus. The rest of the ADPKD cases are accounted for by mutations in the PKD2 and possibly the PKD3 loci. PKD2 has a late onset and is less severe, so some cases may be undiagnosed (3). The PKD1 product, polycystin-1, is predicted to be a plasma membraneassociated glycoprotein that contains 4302 amino acids and has a molecular weight of
460 kD (4,5). Polycystin-1 has a unique structure unlike that of any known protein and may be representative of a new family. The extracellular part of polycystin-1 has two complete and one incomplete leucine-rich repeats flanked by cysteine-rich domains, a cell-wall and stress-response component domain, a C-type lectin domain, a LDL domain, 16 "Ig-like" PKD repeats, and a domain that shows high homology to the sea urchin receptor for egg jelly. The intracellular part contains several potential phosphorylation sites, a proline-rich sequence, a heterotrimeric G protein activation sequence, and a coiled-coil domain (reviewed in reference (6). Polycystin-1 may be involved in cell-cell and cell-matrix interactions, which are important in renal development, but the nature of its involvement in the pathogenesis of ADPKD is not currently understood.
Significant evidence is now available to suggest that polycystin-1 plays an important role in signal transduction. Immunohistochemical studies in our laboratory have shown that polycystin-1 has a wide tissue distribution, with the highest expression in ADPKD and normal embryonic kidneys. Its expression is downregulated in the normal adult kidney (7). A recent study (8) has shown that, after normal cells attach to collagen I in a subconfluent density, polycystin-1 is part of a complex that includes vinculin, talin, tensin,
-actinin, paxillin, p130cas, c-src, and focal adhesion kinase. In confluent normal cells, polycystin-1 localizes at cell-cell junctions where it interacts with E-cadherin and
-, ß-, and
-catenin. ß-catenin has a structural role in cell adhesion as well as being part of the wnt signaling pathway, which plays an important role in cell development (9). Polycystin-1 also activates heterotrimeric G proteins (10), inhibits the degradation of the regulator of G protein signaling protein, RGS7 (11), and can stimulate AP-1dependent transcription through the c-Jun terminal kinase pathway (12). All this evidence suggests that polycystin-1 is part of a signal transduction pathway that plays a role in normal cell development and is perturbed in ADPKD. Previous studies in our laboratory have established that the extracellular component laminin has the ability to enhance the proliferation of tubular epithelial cells in vitro (13,14), and we have more recently demonstrated that the polycystin-1 C-type lectin domain binds carbohydrate structures present in type IV collagen (15).
The LRR of polycystin-1 are among the extracellular domains that may be involved in extracellular matrix (ECM) interactions and signal transduction. Most members of the leucine-rich repeat (LRR) superfamily of proteins are considered to be adhesive proteins, e.g., toll, slit, and the small leucine-rich proteoglycans, biglycan, fibromodulin, decorin, and lumican (16,17). Some members of the superfamily such as CD14 and nerve growth factor receptor (trk) are involved in signal transduction (18). The ability of the members of the LRR superfamily to interact with other proteins is aided by the LRR nonglobular shape and exposed surface of parallel ß-sheets, resulting in a large surface area available for interaction and thus high affinity (19). As in the case of polycystin-1, LRR are usually flanked by cysteine-rich domains (20). Specificity of the protein-protein interaction depends on nonconsensus residues, length of repeats, and flanking domains (16,21).
The purpose of this study is to further investigate the role of the extracellular domains of polycystin-1 in cell-cell and cell-matrix interactions as well as their role in cell proliferation. The binding of the LRR of polycystin-1 to ECM components and their effect on cell proliferation were investigated by use of affinity-purified polycystin-1 and a fusion protein that contains the LRR of polycystin-1.
| Materials and Methods |
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Cell Cultures
Human brain astrocytoma cells were obtained from the European Cell Culture Collection, and embryonic kidney epithelial (293) cells were provided by Dr. M. Slade (MRC Oncology Laboratory, Imperial College London School of Medicine). Cell monolayers were maintained in Dulbeccos Modified Eagles Medium supplemented with 10% fetal bovine serum, 2000 U/ml penicillin, 2000 µg/ml streptomycin, and 20 mM L-glutamine (Sigma, Poole, UK). Both cell lines used express polycystin-1. Kidneys were obtained from patients with bilateral cystic disease with a familial history of ADPKD. Two kidneys (from one male and one female patient) were maintained at 4°C, and fluid was aspirated from superficial cysts. Cyst fluid was snap frozen and stored at -70°C. Kidneys were obtained from UK hospitals, and all procedures were carried out within the guidelines of the Kings College Ethical Committee regulations.
Production of a Fusion Protein Containing the LRR of Polycystin-1
Total RNA was isolated from 293 cells (
1.4 x 105) by use of TRI-reagent (Sigma). Reverse transcription was performed with the use of random hexamer primers and Moloney Murine Leukemia Virus reverse transcriptase (Promega, Southampton, UK). Nucleotides 258 to 1014 of the PKD1 cDNA (accession number L33243) were amplified by PCR by use of 5'-GGCCTGTGGCTCGGATCCCTGGCGGGG-3' as the sense primer and 5'-AAAGAATTCCGTGGAGGAGGGTGGGGCC-3' as the antisense primer, which incorporate the BamHI and EcoRI restriction sites, respectively. PCR was performed by use of Taq polymerase for 35 cycles (95°C for 1 min, 42°C for 1 min, and 74°C for 2 min), followed by a final extension at 74°C for 10 min. The 756-bp PCR product was purified by use of the Wizard PCR Preps DNA Purification System (Promega, UK), cloned into the pGEX-2T expression vector (Amersham Pharmacia Biotech, Amersham, UK) in frame with the glutathione S-transferase (GST) coding region by use of T4 DNA ligase, and transformed into Escherichia coli strain BL21. Transformed E. coli cultures were grown in 100 ml of LB medium (1% tryptone, 0.5% yeast extract, and 1% NaCl) that contained ampicilin (100 µg/ml) and induced for 2 h at 37°C with isopropyl-ß-D-thiogalactopyranoside at a final concentration of 1 mM. Cells were harvested by centrifugation at 5000 x g for 10 min at 4°C, washed with phosphate-buffered saline, reharvested, and resuspended in phosphate-buffered saline that contained 5 mM dithiothreitol. The cells were then sonicated on ice before the addition of Triton X-100 to a final concentration of 1% followed by centrifugation at 20,000 x g for 10 min at 4°C. The GST-LRR fusion protein was purified from the cell lysate by use of the Bulk Purification Module (Amersham Pharmacia Biotech). Unpurified, purified, and control E. coli cell lysates were analyzed by sodium dodecyl sulfatepolyacrylamide gel electrophoresis (SDS-PAGE) in a BioRad Mini-Protean II system and by Western blot analysis that used goat anti-GST (1:1000) and rabbit anti-goat IgGhorseradish peroxidase (HRP) conjugate (1:5000), according to standard procedures (22,23).
Characterization of Polycystin-1 Present in 293 Cell Lysates
Two-Dimensional Gel Electrophoresis (2-D GE).
A total of 293 cell monolayers (1.5 x 106 cells) were trypsinated, washed with 50 mM Tris and 50 mM sorbitol, and lysed on ice for 1 h with the use of lysis buffer (50 mM Tris, 8 M urea, 1% Triton X-100, 50 mM NaF, 0.1 mM Na3VO4, 1 mM PMSF, 5 µg/ml pepstatin, 25 µg/ml aprotonin, and 25 µg/ml leupeptin). The cell lysate (100 µl) was centrifuged at 10,000 x g for 30 min at 4°C, and the supernatant analyzed by 2-D GE. Isoelectric focusing (first dimension) was performed by use of Bio-Rads Mini-Protean II 2-D system according to the method of OFarrell (24), and the second dimension (SDS-PAGE) was performed with the use of Bio-Rads Mini-Protean II slab cell (22). The proteins were then either visualized by silver staining (25) or analyzed by Western blotting that used rabbit anti-polycystin-1 antibodies (1:500) (7), goat anti-rabbit IgG-HRP (1:20000), and enhanced chemiluminescence (Amersham Pharmacia Biotech).
Analysis of Isolated Polycystin-1 by Mass Spectrometry.
After silver staining and Western blotting, the spot corresponding to polycystin-1 was excised from the stained gel, destained by use of 30 mM potassium ferricyanide and 100 mM sodium thiosulfate, and then digested by trypsin as described in reference 26. The digested peptide fragments were extracted from the gel and analyzed by matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry with the use of a LASERMAT 2000 mass spectrometer (Thermo Bioanalysis Ltd., Hemel Hempstead, UK), as described elsewhere (27). The monoisotopic mass values of the tryptic digest fragments were used to search the NCBI nonredundant database by use of the program ProFound, and analysis of the tryptic cleavage of polycystin-1 was performed by use of the program ProteinInfo (http://www.proteometrics.com).
Isolation and Purification of Polycystin-1.
Polycystin-1 was immunoaffinity purified from 293 cells, as described elsewhere (27). The identity of the purified material as intact polycystin-1 was confirmed by SDS-PAGE and Western blotting, followed by tryptic digestion of the visualized band and MALDI-TOF mass spectrographic analysis of the tryptic fragments.
In Vitro Dot Blot Overlay Binding Assays
Laminin fragments (N3L, N3U, and N5) were extracted from cyst fluid as described elsewhere (13). Collagens I, II, III, and IV, whole engleberth holm-swarm laminin, fibronectin (Sigma), cyst fluid, and the laminin fragments (2 µl) were dot blotted on nitrocellulose membranes at the following concentrations (in mg/ml): 1, 0.5, 0.25, 0.125, and 0.01. The concentration of proteins in cyst fluid represents total proteins rather than a specific protein component. The membranes were blocked with 2% milk in Tris-buffered saline that contained 0.5 mM MgCl2 and 0.9 mM CaCl2 for 1 h at room temperature, washed three times with Tris-buffered saline for a total of 15 min, and incubated with the GST-LRR fusion protein (10 µg) for 2 h at 37°C with gentle agitation. The membranes were washed as before, incubated with goat anti-GST (1:1000) for 1 h at room temperature, washed, and then incubated with anti-goat IgGHRP conjugate (1:2000) for 1 h at room temperature. After a final wash, the membranes were developed with 3,3'-diamino-benzidine-tetrahydrochloride (Merck, Poole, UK) for 5 min before being washed with distilled water and scanned at 530 nm (Joyce-Loebl Cromoscan 3 plate scanner). The above binding assay was repeated by use of purified polycystin-1 (1 µg) as the binding protein both in the absence and presence of the GST-LRR fusion protein (2 µg) as well as free GST and bovine serum albumin. In this case, the antibodies used were rabbit anti-polycystin-1 (1:500) and goat anti-rabbit IgG-HRP (1:5000).
Cell Proliferation Assays
Human brain astrocytoma and 293 cells were seeded into 24-well plates at a density of 5 x 104 cells/ml and grown as described above. Cells were harvested by trypsinization at 24, 48, 72, 96, and 120 h, and viable cells were counted by use of an improved Neubauer hemocytometer. Cells were grown in the presence of 100 ng/ml cyst fluid, 100 ng/ml of the LRR, or both. Different LRR concentrations of 20 and 40 ng/ml were also tested. Proliferation assays where the cyst fluid and LRR were omitted, as well as those where GST was added instead, were also performed for control purposes. All proliferation assays were carried out in triplicate and repeated three times.
| Results |
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58 kD) was confirmed by SDS-PAGE and Western blot analysis (Figure 2).
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460 kD and an isoelectric point (PI) value of
6.3. The spot corresponding to polycystin-1 on the stained gel was excised, subjected to tryptic digestion, and the resulting tryptic fragments were detected by MALDI-TOF mass spectometry. The molecular weights obtained for the fragments were used to search the NCBInr database by use of the program ProFound. The search parameters were as follows: database, NCBInr (4/17/2001); taxonomy category, Homo sapiens; protein mass range, 300 to 500 kD; protein PI range, 0 to 14; search for, single protein; digest chemistry, trypsin; maximum missed cuts, 1; modification, by acrylamide (Cys); charge state, MH+ and peptide mass tolerance (MON), ± 0.1 Da. The identity of the protein was found to match the computer-predicted structure of the human polycystic kidney disease 1 protein, polycystin-1 (accession numbers AAC37576, A38971, and NP_000287) with a Z score of 2.43 and sequence coverage of 24%.
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| Discussion |
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It is known that several changes in the composition of the ECM occur during the course of normal tissue development. Fibronectin, laminin, and collagens are among the ECM components that play important roles in this process (30). Fibronectin and laminin affect cell adhesion, morphology, migration, and differentiation. A shift in the collagen isotypes, including type I collagen, is observed during differentiation (31). The binding of the LRR of polycystin-1 to the above ligands may therefore play a role in tissue development. The composition of the ECM is altered as ADPKD progresses, which suggests that polycystin-1-ECM interactions have a functional role.
Recent studies have shown that polycystin-1 is associated with a focal adhesion complex that binds to collagen I in a subconfluent density that resembles the state of uteric bud cells during development (8). Herein we show that this collagen I binding may be mediated by the three incomplete LRR of polycystin-1 in a way that is similar to the binding of collagen I to decorin, an extracellular small leucine-rich proteoglycans that has 10 LRR forming an arch shape, which allows interaction with a single triple helix of collagen I (32). Collagen I forms ionic and polar interactions with the residues of 3 of the 10 LRR of decorin (3234).
The growth suppression effect observed upon the addition of the polycystin-1 LRR to cells in culture in this study was found to be very similar to that of decorin (35). The ectopic expression as well as the exogenous addition of recombinant decorin induces growth suppression in a number of cell lines (35). Growth suppression is associated with the induction of p21 (36), a protein that controls transition from G1-S and inhibits cyclin-dependent kinases and proliferating cell nuclear antigen, arresting the cells in G1. Transfection with the small leucine-rich proteoglycans biglycan and fibromodulin does not have the same effect (36), which indicates that the effect is not caused by the presence of any LRR. Hence, it is possible that polycystin-1 may be involved in a signaling pathway that is affected in ADPKD, causing abnormal cell proliferation.
The addition of the LRR fusion protein demonstrated in this study is therefore suppressing baseline proliferation. The LRR fusion protein added to cells in culture may be competing with the binding of the LRR of polycystin-1 to a ligand, which might be an autocrine laminin-like growth factor in the medium that possibly triggers a signal transduction pathway enhancing cell proliferation. Alternatively, the LRR may have a suppressant effect on proliferation by binding to a putative cell surface receptor (see below).
Cyst fluidderived laminin fragments as well as epidermal growth factor present in cyst fluid have the ability to enhance cell proliferation (13), and herein we show that this effect can be reversed by the addition of the polycystin-1 LRR to cells in culture. One possible explanation of the observed effect is that the cyst fluid components may cause cell proliferation through a cell-signaling pathway of which polycystin-1 and, more specifically, the cystein-flanked LRR domains are components. The addition of the LRR fusion protein to cells in culture competes with the binding of the cyst fluid component to polycystin-1, producing the observed reduction in proliferation. Another possible explanation is that the added LRR bind to a cell surface receptor (see below), causing the observed reduction in cell proliferation. The observation that the addition of 40 ng/ml of LRR to cells in the presence of cyst fluid reduces proliferation to the baseline (control) levels and that the addition of 100 ng/ml of LRR reduces proliferation to lower than baseline levels may indicate that polycystin-1 regulates cell proliferation through two mechanismsone by binding to extracellular ligands to enhance proliferation and the other by binding to a cell surface receptor to reduce proliferation, hence maintaining a balance.
The exact role of polycystin-1 in tubule development and cyst formation is still not fully understood. Although many would presume that a loss of function resulting from mutations in the PKD1 gene is the primary cystogenic force, the increased expression of normal polycystin-1 in mice has been found to induce cyst formation (37), which suggests a possible alternative mechanism in which the protein level is important for maintaining a balance in the rate of proliferation. The latter is also supported by the observation that polycystin-1 expression is upregulated in the fetal stage and in patients with ADPKD and downregulated in normal adults (7). Our results can therefore suggest two possible models for the polycystin-1 involvement in development and cystogenesis (Figure 9). The first model assumes that polycytsin-1 is part of a pathway that induces cell proliferation in response to binding to ECM proteins and therefore the addition of the LRR fusion protein to cells in culture competes with the LRR in polycystin-1, resulting in the observed decrease in cell proliferation. The second model assumes that the LRR of polycystin-1 bind to a cell surface receptor on adjacent cells to reduce the rate of proliferation. In this model, a mutation in the PKD1 gene would result in an abnormal polycystin-1 that is unable to bind to its receptor, hence resulting in the uncontrolled cell proliferation observed in ADPKD.
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| Acknowledgments |
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| References |
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